About
The Baobab Genome Project is an international organization of people that share in a common mission, vision and set of goals focused on preserving and proliferating one of the planet’s most iconic trees.
VISION
Our vision is for a flourishing population of baobab trees providing a sustainable fruit harvest.
MISSION
We are on a mission to map the genomes and geographic distribution of baobab trees around the world.
GOAL
We aim to create a database of over 10,000 baobab trees that includes their location, age, health and genome
Join a Global Citizen-Science Project
To truly capture the diversity of the baobab genome, a widespread and geographically dispersed method of sample collection and categorization is needed. The best way to achieve this is with your help! By identifying baobab trees not already in our database and keeping track of the ones that already are, you can help power this project.
Get involved now!
Malnutrition in Africa – A Global Priority
Malnutrition in many African nations underlies generational cycles of human underdevelopment. Some of the highest rates of disability-adjusted life years associated with micronutrient deficiency (‘hidden hunger’) are found in Africa, as are nearly three-quarters of the 41 countries worldwide characterized by high levels of stunting among children, coupled with anemia and overweight among women.
Africa is predicted to contribute half the world’s population growth over the next 30 years which makes solutions to improve human nutrition on the continent a global priority. Strategies to cultivating foods rich in vitamins, essential minerals and other micronutrients important for healthful diets are key.
Some progress has been made in recent decades through measures such as crop biofortification (in which particular crops are bred to be more nutritious) and the integration of a wider range of nutrient-rich crops into food systems; however, further progress is required. One approach to crop diversification centers on the promotion of African ‘orphan crops’ (also referred to as ‘minor crops’, ‘underutilized plant species’, ‘neglected crops’ and ‘future foods’). Baobab is a prime example of a neglected crop that can help to address African malnutrition in a local and environmentally sustainable way.
To increase the ‘nutritional resilience’ of food systems to the negative effects of climate change on the food supply is a particular need.
The research required to support orphan crop integration into African food systems is complex and multidisciplinary, requiring an understanding of consumption barriers as well as production constraints. Important progress in establishing their competitive cultivation alongside major crops can be achieved, however, through genetic improvement that takes advantage of the extensive genetic diversity frequently found within orphan-crop species. The technical environment for genetic research on orphan crops has transformed in the past decade and can now support such progress because of substantially decreased costs of genome characterization and advances in breeding approaches, including statistical methods supporting genomic and environment-based selection.
The Baobab Genome Project aims to deploy a “citizen science” approach to collecting Baobab samples from all over the African continent for genetic profiling and characterization to optimize Baobab breeding strategies for optimal crop yield.
The Team
The founding team at the Baobab Genome Project brings together a diverse set of skills and experiences across research, academia and business as well as science, biology and engineering.
Todd Michael
co-founder
Research Professor at Salk Institute for Biological Studies
Dr Michael received his PhD in molecular and cellular biology from Dartmouth College and his BA in biology from the University of Virginia. He previously served as professor and director of Informatics at the J. Craig Venter Institute. Prior to that, he held positions including director of Genomics at Abbott Laboratories; head of the Genome Analysis Center at Monsanto; and assistant professor at the Waksman Institute of Rutgers University.
Levi Yant
co-founder
Associate Professor of Evolutionary Genomics at University of Nottingham
Dr Yant completed his PhD at the Max Planck Institute for Developmental Biology, pioneering the application of genome-scale technologies to plants, in order to understand the molecular control of flowering time. While a postdoc at Harvard, Dr Yant focused on evolution and population genomics to understand the molecular basis of adaption.
Pieter van Rooyen
co-founder
Pieter holds a Ph.D. in electronic engineering and has founded multiple startup companies across the tech and life sciences industries. These include Zyray Wireless, ecoATM, Edico Genome and Truvian Sciences. Pieter is originally from Pretoria, South Africa and now lives in San Diego, California.
Gavin Stone
co-founder
Gavin holds a bachelors degree in electronic engineering and has worked in multiple startups and corporates in the tech and life sciences industries. These include Broadcom, Edico Genome and Illumina. Gavin is originally from Durban, South Africa and now lives in San Diego, California.
FAQ
what is citizen science?
Citizen science is the collection and possibly analysis of data by members of the general public in collaboration with professional scientists to accomplish tasks that would be too expensive or time-consuming to accomplish through other means.
where should i look for baobabs?
There are nine species of baobab trees in the world: one in mainland Africa, Adansonia digitata, (the species that can grow to the largest size and to the oldest age), six in Madagascar, and one in Australia and are found in different parts of the Indian subcontinent.
what data is being collected ?
The more we know about the baobabs, the better we can understand and preserve them so all data is valuable. For our citizen scientists we ask for photographs of the tree which provides a visual record, geotagging which identifies the geographic location and a short description of the tree and its apparent state of health for further study and analysis. We will then determine which trees to collect biological sample from for genetic analysis.
what is a genome?
The genome of an organism is the full compliment of all genetic material contained within the nucleus of each cell of that organism. This DNA is typically analyzed using a sequencing instrument and the sequence of necleotides (As, Cs, Gs and Ts) not only determines the species but unique traits of the individual organism. Not only do we look at the baobab’s DNA but also the methylation markers of it’s epigenome which can change over time depending on it’s environment. In addition, we sequence the DNA of the microbes living in, around and under the baobab – it’s microbiome.
how will the data be used?
The data will be used by scientists and bioinformaticians working to save and preserve the baobab trees. They are working to understand impacts on the habitats of the trees due to climate change and human development and on how to improve sustainability and yields of this important food source.
who can i contact if i have questions?
We are available to answer any questions you have – contact us via our email address below or on Instagram.